Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 AC158388.3-202ENSMUST00000225517 775 ntBASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm12712-201ENSMUST00000120676 801 ntBASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm15549-201ENSMUST00000121595 622 ntBASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Gm18801-201ENSMUST00000186616 536 ntBASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 AC158392.3-201ENSMUST00000224271 1284 ntBASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hfm1D3Z4R1 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Gm12194-201ENSMUST00000117756 1012 ntBASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Gm15172-201ENSMUST00000118945 1046 ntBASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Gm42655-201ENSMUST00000202782 1134 ntBASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Gm45135-201ENSMUST00000206787 1184 ntBASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 AC153929.1-201ENSMUST00000219009 303 ntBASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hfm1D3Z4R1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Gm13422-201ENSMUST00000118834 504 ntBASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Gm5555-201ENSMUST00000120352 1111 ntBASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Gm45085-201ENSMUST00000209100 441 ntBASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Gm5996-201ENSMUST00000211110 718 ntBASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Gm8181-201ENSMUST00000062242 669 ntBASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Gm9415-201ENSMUST00000200462 1321 ntBASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hfm1D3Z4R1 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms