Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav7n-4A0A075B620 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Gm6152-201ENSMUST00000151704 340 ntBASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Gm5354-201ENSMUST00000182417 973 ntBASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 AC132104.2-201ENSMUST00000215011 266 ntBASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Gm8396-201ENSMUST00000057361 823 ntBASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav7n-4A0A075B620 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Gm11618-201ENSMUST00000117946 267 ntBASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav7n-4A0A075B620 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms