Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm12015-201ENSMUST00000117065 843 ntBASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm25700-201ENSMUST00000177693 110 ntBASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm37466-201ENSMUST00000195692 652 ntBASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm42937-201ENSMUST00000197360 752 ntBASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm44651-201ENSMUST00000207343 372 ntBASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gzmn-202ENSMUST00000225535 989 ntBASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Gm44942-201ENSMUST00000096093 2072 ntBASIC11□□□□□ -0.65
Clcf1Q9QZM3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Gm43908-201ENSMUST00000205074 1472 ntBASIC11□□□□□ -0.65
Clcf1Q9QZM3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11□□□□□ -0.65
Clcf1Q9QZM3 Gm9279-201ENSMUST00000223175 1606 ntBASIC11□□□□□ -0.65
Clcf1Q9QZM3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Gm6963-201ENSMUST00000147879 379 ntBASIC11□□□□□ -0.65
Clcf1Q9QZM3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Gm9022-201ENSMUST00000182482 992 ntBASIC11□□□□□ -0.65
Clcf1Q9QZM3 Rprl1-202ENSMUST00000198476 238 ntBASIC11□□□□□ -0.65
Clcf1Q9QZM3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Gm5363-201ENSMUST00000211927 938 ntBASIC11□□□□□ -0.65
Clcf1Q9QZM3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Rubie-203ENSMUST00000227803 2430 ntBASIC11□□□□□ -0.65
Clcf1Q9QZM3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clcf1Q9QZM3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11□□□□□ -0.65
Clcf1Q9QZM3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Clcf1Q9QZM3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms