Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gm12241-201ENSMUST00000118330 726 ntBASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gm13297-201ENSMUST00000120205 934 ntBASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gm9083-201ENSMUST00000120423 819 ntBASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gm37201-201ENSMUST00000191845 523 ntBASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gm43822-201ENSMUST00000200285 476 ntBASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gm45865-201ENSMUST00000211815 945 ntBASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a2Q9JLR1 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61a2Q9JLR1 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms