Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
U2af1Q9D883 Gm15610-201ENSMUST00000120584 195 ntBASIC15.88■□□□□ 0.13
U2af1Q9D883 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
U2af1Q9D883 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
U2af1Q9D883 Gm27530-201ENSMUST00000184096 98 ntBASIC15.88■□□□□ 0.13
U2af1Q9D883 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC15.88■□□□□ 0.13
U2af1Q9D883 Gm43184-201ENSMUST00000197247 542 ntBASIC15.88■□□□□ 0.13
U2af1Q9D883 Gm4157-201ENSMUST00000211647 679 ntBASIC15.88■□□□□ 0.13
U2af1Q9D883 Gm26448-201ENSMUST00000082446 203 ntBASIC15.88■□□□□ 0.13
U2af1Q9D883 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
U2af1Q9D883 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.88■□□□□ 0.13
U2af1Q9D883 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.88■□□□□ 0.13
U2af1Q9D883 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
U2af1Q9D883 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.87■□□□□ 0.13
U2af1Q9D883 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC15.87■□□□□ 0.13
U2af1Q9D883 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Gm23596-201ENSMUST00000104304 132 ntBASIC15.87■□□□□ 0.13
U2af1Q9D883 Gm15515-201ENSMUST00000117827 822 ntBASIC15.87■□□□□ 0.13
U2af1Q9D883 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC15.87■□□□□ 0.13
U2af1Q9D883 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.87■□□□□ 0.13
U2af1Q9D883 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
U2af1Q9D883 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
U2af1Q9D883 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
U2af1Q9D883 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
U2af1Q9D883 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
U2af1Q9D883 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
U2af1Q9D883 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 B9d1os-201ENSMUST00000137010 674 ntBASIC15.86■□□□□ 0.13
U2af1Q9D883 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC15.86■□□□□ 0.13
U2af1Q9D883 Gm8343-201ENSMUST00000182705 994 ntBASIC15.86■□□□□ 0.13
U2af1Q9D883 Gm27390-201ENSMUST00000184516 176 ntBASIC15.86■□□□□ 0.13
U2af1Q9D883 Gm42629-201ENSMUST00000199063 1102 ntBASIC15.86■□□□□ 0.13
U2af1Q9D883 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Gm807-202ENSMUST00000224929 408 ntBASIC15.86■□□□□ 0.13
U2af1Q9D883 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
U2af1Q9D883 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Gm36970-201ENSMUST00000193688 1859 ntBASIC15.86■□□□□ 0.13
U2af1Q9D883 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
U2af1Q9D883 Gm8155-201ENSMUST00000216363 1612 ntBASIC15.86■□□□□ 0.13
U2af1Q9D883 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
U2af1Q9D883 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
U2af1Q9D883 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC15.85■□□□□ 0.13
U2af1Q9D883 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
U2af1Q9D883 Gm37348-201ENSMUST00000193104 1789 ntBASIC15.85■□□□□ 0.13
U2af1Q9D883 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms