Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Stag1Q9D3E6 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Stag1Q9D3E6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.43□□□□□ -0.1
Stag1Q9D3E6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Stag1Q9D3E6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Stag1Q9D3E6 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Stag1Q9D3E6 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Stag1Q9D3E6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Stag1Q9D3E6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Mir7686-201ENSMUST00000200604 57 ntBASIC14.42□□□□□ -0.1
Stag1Q9D3E6 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Gm43916-201ENSMUST00000205062 967 ntBASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Gm10179-201ENSMUST00000086233 688 ntBASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.42□□□□□ -0.1
Stag1Q9D3E6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Stag1Q9D3E6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Gm17391-201ENSMUST00000171036 126 ntBASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Gm4034-201ENSMUST00000187674 480 ntBASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Stag1Q9D3E6 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms