Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm14277-201ENSMUST00000121195 360 ntBASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Gm27390-201ENSMUST00000184516 176 ntBASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Gm17812-201ENSMUST00000204935 318 ntBASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps28Q9D1C8 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Gm8385-201ENSMUST00000058999 643 ntBASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps28Q9D1C8 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Gm45433-201ENSMUST00000209386 247 ntBASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Gm5363-201ENSMUST00000211927 938 ntBASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps28Q9D1C8 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Gm24990-201ENSMUST00000157406 323 ntBASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.41□□□□□ -0.42
Vps28Q9D1C8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps28Q9D1C8 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms