Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Scrt1Q99M85 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Gm14644-201ENSMUST00000116671 647 ntBASIC10.65□□□□□ -0.7
Scrt1Q99M85 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Gm13315-201ENSMUST00000120376 991 ntBASIC10.65□□□□□ -0.7
Scrt1Q99M85 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Gm5616-201ENSMUST00000165252 384 ntBASIC10.65□□□□□ -0.7
Scrt1Q99M85 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Gm8741-201ENSMUST00000174736 384 ntBASIC10.65□□□□□ -0.7
Scrt1Q99M85 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.65□□□□□ -0.7
Scrt1Q99M85 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Scrt1Q99M85 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Scrt1Q99M85 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Scrt1Q99M85 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
Scrt1Q99M85 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Scrt1Q99M85 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Scrt1Q99M85 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Scrt1Q99M85 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Scrt1Q99M85 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Scrt1Q99M85 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
Scrt1Q99M85 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.65□□□□□ -0.71
Scrt1Q99M85 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.64□□□□□ -0.71
Scrt1Q99M85 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.64□□□□□ -0.71
Scrt1Q99M85 Gm12291-201ENSMUST00000121627 311 ntBASIC10.64□□□□□ -0.71
Scrt1Q99M85 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.64□□□□□ -0.71
Scrt1Q99M85 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.64□□□□□ -0.71
Scrt1Q99M85 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Gm7666-201ENSMUST00000146631 819 ntBASIC10.64□□□□□ -0.71
Scrt1Q99M85 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Gm38210-201ENSMUST00000191944 809 ntBASIC10.64□□□□□ -0.71
Scrt1Q99M85 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Gm43916-201ENSMUST00000205062 967 ntBASIC10.64□□□□□ -0.71
Scrt1Q99M85 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.64□□□□□ -0.71
Scrt1Q99M85 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.64□□□□□ -0.71
Scrt1Q99M85 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Gm10076-201ENSMUST00000073238 384 ntBASIC10.64□□□□□ -0.71
Scrt1Q99M85 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.64□□□□□ -0.71
Scrt1Q99M85 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.64□□□□□ -0.71
Scrt1Q99M85 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms