Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
TrabdQ99JY4 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Gm12857-201ENSMUST00000117678 592 ntBASIC12.58□□□□□ -0.4
TrabdQ99JY4 Gm15515-201ENSMUST00000117827 822 ntBASIC12.58□□□□□ -0.4
TrabdQ99JY4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.58□□□□□ -0.4
TrabdQ99JY4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Gm8100-201ENSMUST00000182906 988 ntBASIC12.58□□□□□ -0.4
TrabdQ99JY4 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.58□□□□□ -0.4
TrabdQ99JY4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Gm6905-201ENSMUST00000205729 511 ntBASIC12.58□□□□□ -0.4
TrabdQ99JY4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
TrabdQ99JY4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
TrabdQ99JY4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TrabdQ99JY4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TrabdQ99JY4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.57□□□□□ -0.4
TrabdQ99JY4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.57□□□□□ -0.4
TrabdQ99JY4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TrabdQ99JY4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.57□□□□□ -0.4
TrabdQ99JY4 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TrabdQ99JY4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TrabdQ99JY4 Gm22902-201ENSMUST00000158488 302 ntBASIC12.57□□□□□ -0.4
TrabdQ99JY4 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TrabdQ99JY4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
TrabdQ99JY4 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.57□□□□□ -0.4
TrabdQ99JY4 Gm2553-201ENSMUST00000215986 605 ntBASIC12.57□□□□□ -0.4
TrabdQ99JY4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TrabdQ99JY4 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TrabdQ99JY4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TrabdQ99JY4 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.57□□□□□ -0.4
TrabdQ99JY4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TrabdQ99JY4 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TrabdQ99JY4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.57□□□□□ -0.4
TrabdQ99JY4 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.57□□□□□ -0.4
TrabdQ99JY4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TrabdQ99JY4 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.56□□□□□ -0.4
TrabdQ99JY4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TrabdQ99JY4 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.56□□□□□ -0.4
TrabdQ99JY4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.56□□□□□ -0.4
TrabdQ99JY4 Gm44124-201ENSMUST00000204159 472 ntBASIC12.56□□□□□ -0.4
TrabdQ99JY4 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Gm10288-201ENSMUST00000084614 537 ntBASIC12.56□□□□□ -0.4
TrabdQ99JY4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TrabdQ99JY4 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.56□□□□□ -0.4
TrabdQ99JY4 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms