Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd2Q99JR8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd2Q99JR8 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd2Q99JR8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.22□□□□□ -0.45
Smarcd2Q99JR8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smarcd2Q99JR8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.22□□□□□ -0.45
Smarcd2Q99JR8 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.22□□□□□ -0.45
Smarcd2Q99JR8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd2Q99JR8 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smarcd2Q99JR8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd2Q99JR8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.22□□□□□ -0.45
Smarcd2Q99JR8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smarcd2Q99JR8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Gm1848-201ENSMUST00000120711 789 ntBASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Mir1901-201ENSMUST00000122616 78 ntBASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Gm21092-201ENSMUST00000178995 955 ntBASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Gm29155-201ENSMUST00000185910 269 ntBASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Gm38117-201ENSMUST00000194653 939 ntBASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.21□□□□□ -0.45
Smarcd2Q99JR8 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.21□□□□□ -0.46
Smarcd2Q99JR8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd2Q99JR8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd2Q99JR8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd2Q99JR8 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Smarcd2Q99JR8 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd2Q99JR8 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd2Q99JR8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd2Q99JR8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd2Q99JR8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd2Q99JR8 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd2Q99JR8 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd2Q99JR8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smarcd2Q99JR8 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Gm16071-201ENSMUST00000119589 793 ntBASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Gm25072-201ENSMUST00000175233 235 ntBASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Gm17826-201ENSMUST00000189720 798 ntBASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Gm37905-201ENSMUST00000195310 341 ntBASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd2Q99JR8 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms