Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col20a1Q923P0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col20a1Q923P0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col20a1Q923P0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Col20a1Q923P0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Col20a1Q923P0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.26□□□□□ -0.13
Col20a1Q923P0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Gm45575-201ENSMUST00000210283 548 ntBASIC14.26□□□□□ -0.13
Col20a1Q923P0 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.26□□□□□ -0.13
Col20a1Q923P0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.26□□□□□ -0.13
Col20a1Q923P0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.26□□□□□ -0.13
Col20a1Q923P0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col20a1Q923P0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col20a1Q923P0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Col20a1Q923P0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.25□□□□□ -0.13
Col20a1Q923P0 Gm15207-201ENSMUST00000119259 442 ntBASIC14.25□□□□□ -0.13
Col20a1Q923P0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Gm4310-201ENSMUST00000177847 889 ntBASIC14.25□□□□□ -0.13
Col20a1Q923P0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.25□□□□□ -0.13
Col20a1Q923P0 Gm37835-201ENSMUST00000193305 361 ntBASIC14.25□□□□□ -0.13
Col20a1Q923P0 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.25□□□□□ -0.13
Col20a1Q923P0 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.25□□□□□ -0.13
Col20a1Q923P0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.25□□□□□ -0.13
Col20a1Q923P0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col20a1Q923P0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col20a1Q923P0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col20a1Q923P0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col20a1Q923P0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col20a1Q923P0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col20a1Q923P0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col20a1Q923P0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col20a1Q923P0 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.24□□□□□ -0.13
Col20a1Q923P0 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col20a1Q923P0 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.24□□□□□ -0.13
Col20a1Q923P0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.24□□□□□ -0.13
Col20a1Q923P0 Gm24514-201ENSMUST00000174961 285 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms