Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Gm25214-201ENSMUST00000104573 129 ntBASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Gm11222-201ENSMUST00000119005 738 ntBASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pcdha8Q91Y12 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Gm14832-201ENSMUST00000121289 322 ntBASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Gm42599-201ENSMUST00000201308 469 ntBASIC11.79□□□□□ -0.52
Pcdha8Q91Y12 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms