Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Gm12928-201ENSMUST00000117115 573 ntBASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Rpa1Q8VEE4 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Gm5244-202ENSMUST00000189517 743 ntBASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Gm18018-201ENSMUST00000198273 408 ntBASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa1Q8VEE4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms