Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shtn1Q8K2Q9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shtn1Q8K2Q9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Gm12516-201ENSMUST00000120819 385 ntBASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Gm19091-201ENSMUST00000208120 978 ntBASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shtn1Q8K2Q9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shtn1Q8K2Q9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Gm11801-201ENSMUST00000117807 746 ntBASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Gm8731-201ENSMUST00000118088 412 ntBASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Gm11511-201ENSMUST00000118146 540 ntBASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Gm4654-201ENSMUST00000183305 982 ntBASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shtn1Q8K2Q9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Gm11836-201ENSMUST00000121022 441 ntBASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Gm6867-201ENSMUST00000219165 425 ntBASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shtn1Q8K2Q9 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms