Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rfwd3Q8CIK8 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Gm14109-201ENSMUST00000118814 309 ntBASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfwd3Q8CIK8 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Gm25668-201ENSMUST00000157700 129 ntBASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Gm27046-201ENSMUST00000182160 463 ntBASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Gm13097-201ENSMUST00000210722 397 ntBASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Gm9996-201ENSMUST00000070359 913 ntBASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rfwd3Q8CIK8 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Rfwd3Q8CIK8 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.4□□□□□ -0.59
Rfwd3Q8CIK8 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rfwd3Q8CIK8 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.4□□□□□ -0.59
Rfwd3Q8CIK8 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rfwd3Q8CIK8 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfwd3Q8CIK8 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfwd3Q8CIK8 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.39□□□□□ -0.59
Rfwd3Q8CIK8 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfwd3Q8CIK8 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfwd3Q8CIK8 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfwd3Q8CIK8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rfwd3Q8CIK8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rfwd3Q8CIK8 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms