Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Gm13611-201ENSMUST00000118269 318 ntBASIC14.26□□□□□ -0.13
E4f1Q8CCE9 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Gm37666-201ENSMUST00000194110 866 ntBASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Gm18730-201ENSMUST00000218038 343 ntBASIC14.26□□□□□ -0.13
E4f1Q8CCE9 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
E4f1Q8CCE9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Gm11597-201ENSMUST00000121423 964 ntBASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Gm45598-202ENSMUST00000210719 986 ntBASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.25□□□□□ -0.13
E4f1Q8CCE9 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
E4f1Q8CCE9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Mir1943-201ENSMUST00000158276 73 ntBASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Gm23699-201ENSMUST00000158835 135 ntBASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.24□□□□□ -0.13
E4f1Q8CCE9 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
E4f1Q8CCE9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms