Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm6606-201ENSMUST00000193613 947 ntBASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Gm37207-201ENSMUST00000194284 296 ntBASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Gm9797-202ENSMUST00000218003 294 ntBASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.43□□□□□ -0.9
Chd9Q8BYH8 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Gm43547-201ENSMUST00000197729 328 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Gm18561-201ENSMUST00000206027 804 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Gm18042-201ENSMUST00000219887 790 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Gm5291-201ENSMUST00000201965 899 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Gm43852-201ENSMUST00000202098 917 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Mir598-201ENSMUST00000102094 79 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Gm11540-201ENSMUST00000117457 780 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Gm8226-201ENSMUST00000190511 798 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 AC154477.1-201ENSMUST00000226515 773 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 AC137842.2-201ENSMUST00000227734 797 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Gm4978-201ENSMUST00000071565 801 ntBASIC9.42□□□□□ -0.9
Chd9Q8BYH8 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chd9Q8BYH8 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms