Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.68□□□□□ -0.7
SprnQ8BWU1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.67□□□□□ -0.7
SprnQ8BWU1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Gm15198-201ENSMUST00000117283 177 ntBASIC10.67□□□□□ -0.7
SprnQ8BWU1 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.67□□□□□ -0.7
SprnQ8BWU1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Gm27682-201ENSMUST00000183930 110 ntBASIC10.67□□□□□ -0.7
SprnQ8BWU1 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Gm10146-201ENSMUST00000072739 309 ntBASIC10.67□□□□□ -0.7
SprnQ8BWU1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.67□□□□□ -0.7
SprnQ8BWU1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SprnQ8BWU1 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.66□□□□□ -0.7
SprnQ8BWU1 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.66□□□□□ -0.7
SprnQ8BWU1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.66□□□□□ -0.7
SprnQ8BWU1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Gm4271-201ENSMUST00000174444 973 ntBASIC10.66□□□□□ -0.7
SprnQ8BWU1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.66□□□□□ -0.7
SprnQ8BWU1 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Gm43002-201ENSMUST00000200310 155 ntBASIC10.66□□□□□ -0.7
SprnQ8BWU1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.66□□□□□ -0.7
SprnQ8BWU1 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.66□□□□□ -0.7
SprnQ8BWU1 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms