Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp54Q8BL06 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC16.89■□□□□ 0.3
Usp54Q8BL06 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC16.89■□□□□ 0.3
Usp54Q8BL06 Gm37638-201ENSMUST00000194337 1123 ntBASIC16.89■□□□□ 0.3
Usp54Q8BL06 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Usp54Q8BL06 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC16.89■□□□□ 0.3
Usp54Q8BL06 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Usp54Q8BL06 Gm45500-201ENSMUST00000211676 803 ntBASIC16.89■□□□□ 0.3
Usp54Q8BL06 AC134248.1-201ENSMUST00000216113 1176 ntBASIC16.89■□□□□ 0.3
Usp54Q8BL06 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.89■□□□□ 0.3
Usp54Q8BL06 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Usp54Q8BL06 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Gm5641-201ENSMUST00000091130 1488 ntBASIC16.89■□□□□ 0.29
Usp54Q8BL06 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Gm44292-201ENSMUST00000205194 2364 ntBASIC16.89■□□□□ 0.29
Usp54Q8BL06 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Gm14270-201ENSMUST00000118388 846 ntBASIC16.89■□□□□ 0.29
Usp54Q8BL06 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC16.89■□□□□ 0.29
Usp54Q8BL06 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Gm3433-201ENSMUST00000210149 1058 ntBASIC16.89■□□□□ 0.29
Usp54Q8BL06 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp54Q8BL06 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Gm43334-201ENSMUST00000197740 1318 ntBASIC16.88■□□□□ 0.29
Usp54Q8BL06 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp54Q8BL06 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Gm18798-201ENSMUST00000187264 1700 ntBASIC16.88■□□□□ 0.29
Usp54Q8BL06 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Gm15036-201ENSMUST00000118880 400 ntBASIC16.88■□□□□ 0.29
Usp54Q8BL06 Gm15003-201ENSMUST00000118884 446 ntBASIC16.88■□□□□ 0.29
Usp54Q8BL06 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Gm17070-201ENSMUST00000170463 784 ntBASIC16.88■□□□□ 0.29
Usp54Q8BL06 Gm28833-201ENSMUST00000189671 559 ntBASIC16.88■□□□□ 0.29
Usp54Q8BL06 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Gm18204-201ENSMUST00000209835 793 ntBASIC16.88■□□□□ 0.29
Usp54Q8BL06 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Gm5053-201ENSMUST00000208361 1678 ntBASIC16.88■□□□□ 0.29
Usp54Q8BL06 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Rnf17-202ENSMUST00000223627 2077 ntBASIC16.88■□□□□ 0.29
Usp54Q8BL06 Gm37600-201ENSMUST00000193764 3292 ntBASIC16.88■□□□□ 0.29
Usp54Q8BL06 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp54Q8BL06 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp54Q8BL06 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp54Q8BL06 Gm37391-201ENSMUST00000194891 2318 ntBASIC16.87■□□□□ 0.29
Usp54Q8BL06 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.87■□□□□ 0.29
Usp54Q8BL06 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Usp54Q8BL06 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp54Q8BL06 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp54Q8BL06 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp54Q8BL06 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp54Q8BL06 Gm22379-201ENSMUST00000157480 131 ntBASIC16.87■□□□□ 0.29
Usp54Q8BL06 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Usp54Q8BL06 Gm4895-201ENSMUST00000181646 1137 ntBASIC16.87■□□□□ 0.29
Usp54Q8BL06 Gm9081-201ENSMUST00000182346 991 ntBASIC16.87■□□□□ 0.29
Usp54Q8BL06 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Usp54Q8BL06 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Usp54Q8BL06 AC126799.1-201ENSMUST00000221976 246 ntBASIC16.87■□□□□ 0.29
Usp54Q8BL06 AC153152.3-201ENSMUST00000222188 1135 ntBASIC16.87■□□□□ 0.29
Usp54Q8BL06 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp54Q8BL06 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp54Q8BL06 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp54Q8BL06 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Usp54Q8BL06 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms