Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.29□□□□□ -0.6
Pif1Q80SX8 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.29□□□□□ -0.6
Pif1Q80SX8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Gm15515-201ENSMUST00000117827 822 ntBASIC11.28□□□□□ -0.6
Pif1Q80SX8 Gm15131-201ENSMUST00000119124 595 ntBASIC11.28□□□□□ -0.6
Pif1Q80SX8 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.28□□□□□ -0.6
Pif1Q80SX8 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Gm18038-201ENSMUST00000197900 485 ntBASIC11.28□□□□□ -0.6
Pif1Q80SX8 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.28□□□□□ -0.6
Pif1Q80SX8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.28□□□□□ -0.6
Pif1Q80SX8 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.28□□□□□ -0.6
Pif1Q80SX8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pif1Q80SX8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pif1Q80SX8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pif1Q80SX8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pif1Q80SX8 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pif1Q80SX8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pif1Q80SX8 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pif1Q80SX8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pif1Q80SX8 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Gm24934-201ENSMUST00000103764 111 ntBASIC11.27□□□□□ -0.61
Pif1Q80SX8 Gm14058-201ENSMUST00000116082 735 ntBASIC11.27□□□□□ -0.61
Pif1Q80SX8 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.27□□□□□ -0.61
Pif1Q80SX8 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Mir7677-201ENSMUST00000184226 67 ntBASIC11.27□□□□□ -0.61
Pif1Q80SX8 Gm19353-201ENSMUST00000184561 445 ntBASIC11.27□□□□□ -0.61
Pif1Q80SX8 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Gm44958-201ENSMUST00000203734 736 ntBASIC11.27□□□□□ -0.61
Pif1Q80SX8 Gm17827-201ENSMUST00000211825 742 ntBASIC11.27□□□□□ -0.61
Pif1Q80SX8 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Gm5369-201ENSMUST00000217499 588 ntBASIC11.27□□□□□ -0.61
Pif1Q80SX8 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.27□□□□□ -0.61
Pif1Q80SX8 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pif1Q80SX8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms