Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm15617-201ENSMUST00000118973 771 ntBASIC10.25□□□□□ -0.77
Rif1Q6PR54 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.25□□□□□ -0.77
Rif1Q6PR54 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm30671-201ENSMUST00000214898 318 ntBASIC10.25□□□□□ -0.77
Rif1Q6PR54 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.25□□□□□ -0.77
Rif1Q6PR54 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.25□□□□□ -0.77
Rif1Q6PR54 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm23745-201ENSMUST00000104230 125 ntBASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm15625-201ENSMUST00000117617 1093 ntBASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm13315-201ENSMUST00000120376 991 ntBASIC10.25□□□□□ -0.77
Rif1Q6PR54 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.25□□□□□ -0.77
Rif1Q6PR54 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm33707-201ENSMUST00000195135 569 ntBASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm8234-201ENSMUST00000198523 1107 ntBASIC10.25□□□□□ -0.77
Rif1Q6PR54 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.25□□□□□ -0.77
Rif1Q6PR54 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.25□□□□□ -0.77
Rif1Q6PR54 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm10580-201ENSMUST00000097985 396 ntBASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm10581-201ENSMUST00000097986 231 ntBASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm10582-201ENSMUST00000097987 396 ntBASIC10.25□□□□□ -0.77
Rif1Q6PR54 Gm10583-201ENSMUST00000097988 396 ntBASIC10.25□□□□□ -0.77
Rif1Q6PR54 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rif1Q6PR54 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Gm14807-201ENSMUST00000116640 983 ntBASIC10.24□□□□□ -0.77
Rif1Q6PR54 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Gm15815-201ENSMUST00000120569 255 ntBASIC10.24□□□□□ -0.77
Rif1Q6PR54 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Rif1Q6PR54 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Gm24844-201ENSMUST00000158679 127 ntBASIC10.24□□□□□ -0.77
Rif1Q6PR54 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Gm24328-201ENSMUST00000175104 67 ntBASIC10.24□□□□□ -0.77
Rif1Q6PR54 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC10.24□□□□□ -0.77
Rif1Q6PR54 AC152169.1-201ENSMUST00000223901 701 ntBASIC10.24□□□□□ -0.77
Rif1Q6PR54 AL844586.1-201ENSMUST00000224297 1042 ntBASIC10.24□□□□□ -0.77
Rif1Q6PR54 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.24□□□□□ -0.77
Rif1Q6PR54 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.24□□□□□ -0.77
Rif1Q6PR54 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Gm14524-201ENSMUST00000121066 683 ntBASIC10.24□□□□□ -0.77
Rif1Q6PR54 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms