Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Scn9aQ62205 Gm6114-201ENSMUST00000182472 968 ntBASIC13.98□□□□□ -0.17
Scn9aQ62205 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Scn9aQ62205 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Scn9aQ62205 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.98□□□□□ -0.17
Scn9aQ62205 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.98□□□□□ -0.17
Scn9aQ62205 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Scn9aQ62205 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn9aQ62205 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn9aQ62205 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn9aQ62205 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Scn9aQ62205 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.97□□□□□ -0.17
Scn9aQ62205 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Scn9aQ62205 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Scn9aQ62205 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.97□□□□□ -0.17
Scn9aQ62205 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Scn9aQ62205 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Gm26368-201ENSMUST00000157826 118 ntBASIC13.97□□□□□ -0.17
Scn9aQ62205 Gm43854-201ENSMUST00000200418 394 ntBASIC13.97□□□□□ -0.17
Scn9aQ62205 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.97□□□□□ -0.17
Scn9aQ62205 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.97□□□□□ -0.17
Scn9aQ62205 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.97□□□□□ -0.17
Scn9aQ62205 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Scn9aQ62205 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.97□□□□□ -0.17
Scn9aQ62205 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.97□□□□□ -0.17
Scn9aQ62205 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn9aQ62205 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Gm14993-201ENSMUST00000121180 164 ntBASIC13.96□□□□□ -0.17
Scn9aQ62205 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.96□□□□□ -0.17
Scn9aQ62205 Gm12906-201ENSMUST00000154610 441 ntBASIC13.96□□□□□ -0.17
Scn9aQ62205 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.96□□□□□ -0.17
Scn9aQ62205 Gm42430-201ENSMUST00000197209 616 ntBASIC13.96□□□□□ -0.17
Scn9aQ62205 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn9aQ62205 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Scn9aQ62205 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn9aQ62205 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn9aQ62205 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn9aQ62205 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Scn9aQ62205 Gng5-ps-201ENSMUST00000120931 205 ntBASIC13.96□□□□□ -0.18
Scn9aQ62205 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC13.96□□□□□ -0.18
Scn9aQ62205 Gm45085-201ENSMUST00000209100 441 ntBASIC13.96□□□□□ -0.18
Scn9aQ62205 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC13.96□□□□□ -0.18
Scn9aQ62205 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn9aQ62205 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn9aQ62205 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.96□□□□□ -0.18
Scn9aQ62205 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Scn9aQ62205 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Scn9aQ62205 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC13.96□□□□□ -0.18
Scn9aQ62205 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn9aQ62205 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn9aQ62205 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn9aQ62205 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn9aQ62205 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn9aQ62205 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn9aQ62205 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scn9aQ62205 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms