Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
ClpbQ60649 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.64□□□□□ -0.55
ClpbQ60649 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.64□□□□□ -0.55
ClpbQ60649 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
ClpbQ60649 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
ClpbQ60649 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.64□□□□□ -0.55
ClpbQ60649 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
ClpbQ60649 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
ClpbQ60649 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.64□□□□□ -0.55
ClpbQ60649 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.64□□□□□ -0.55
ClpbQ60649 Gm44882-201ENSMUST00000205702 802 ntBASIC11.64□□□□□ -0.55
ClpbQ60649 Gm18056-201ENSMUST00000207670 568 ntBASIC11.64□□□□□ -0.55
ClpbQ60649 Gm18061-201ENSMUST00000208350 562 ntBASIC11.64□□□□□ -0.55
ClpbQ60649 Gm18063-201ENSMUST00000208529 568 ntBASIC11.64□□□□□ -0.55
ClpbQ60649 Gm18052-201ENSMUST00000208750 559 ntBASIC11.64□□□□□ -0.55
ClpbQ60649 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.64□□□□□ -0.55
ClpbQ60649 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.64□□□□□ -0.55
ClpbQ60649 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.64□□□□□ -0.55
ClpbQ60649 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.64□□□□□ -0.55
ClpbQ60649 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.64□□□□□ -0.55
ClpbQ60649 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.64□□□□□ -0.55
ClpbQ60649 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
ClpbQ60649 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.64□□□□□ -0.55
ClpbQ60649 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.63□□□□□ -0.55
ClpbQ60649 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.63□□□□□ -0.55
ClpbQ60649 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
ClpbQ60649 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.63□□□□□ -0.55
ClpbQ60649 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
ClpbQ60649 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Gm28882-201ENSMUST00000185504 314 ntBASIC11.63□□□□□ -0.55
ClpbQ60649 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.63□□□□□ -0.55
ClpbQ60649 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.63□□□□□ -0.55
ClpbQ60649 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Gm39404-201ENSMUST00000216350 313 ntBASIC11.63□□□□□ -0.55
ClpbQ60649 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.63□□□□□ -0.55
ClpbQ60649 Gm10312-201ENSMUST00000078515 489 ntBASIC11.63□□□□□ -0.55
ClpbQ60649 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
ClpbQ60649 Mir433-201ENSMUST00000093564 124 ntBASIC11.63□□□□□ -0.55
ClpbQ60649 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
ClpbQ60649 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.63□□□□□ -0.55
ClpbQ60649 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
ClpbQ60649 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.63□□□□□ -0.55
ClpbQ60649 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.63□□□□□ -0.55
ClpbQ60649 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClpbQ60649 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.62□□□□□ -0.55
ClpbQ60649 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ClpbQ60649 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms