Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm20949-201ENSMUST00000206478 952 ntBASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Gm44872-201ENSMUST00000207864 420 ntBASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav15-1-dv6-1Q5R1D2 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.4□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm11597-201ENSMUST00000121423 964 ntBASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm8018-201ENSMUST00000173536 789 ntBASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Mir7023-201ENSMUST00000185093 64 ntBASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms