Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim80Q3V061 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim80Q3V061 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trim80Q3V061 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim80Q3V061 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim80Q3V061 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.55□□□□□ -0.4
Trim80Q3V061 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim80Q3V061 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim80Q3V061 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim80Q3V061 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim80Q3V061 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim80Q3V061 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Gm13350-201ENSMUST00000120519 479 ntBASIC12.55□□□□□ -0.4
Trim80Q3V061 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim80Q3V061 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Gm27243-201ENSMUST00000183964 521 ntBASIC12.55□□□□□ -0.4
Trim80Q3V061 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim80Q3V061 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim80Q3V061 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trim80Q3V061 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim80Q3V061 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim80Q3V061 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim80Q3V061 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.55□□□□□ -0.4
Trim80Q3V061 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim80Q3V061 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trim80Q3V061 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.54□□□□□ -0.4
Trim80Q3V061 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim80Q3V061 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Trim80Q3V061 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim80Q3V061 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.54□□□□□ -0.4
Trim80Q3V061 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim80Q3V061 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Gm13342-201ENSMUST00000121055 207 ntBASIC12.54□□□□□ -0.4
Trim80Q3V061 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim80Q3V061 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim80Q3V061 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim80Q3V061 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim80Q3V061 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim80Q3V061 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.54□□□□□ -0.4
Trim80Q3V061 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Gm9823-201ENSMUST00000051212 327 ntBASIC12.54□□□□□ -0.4
Trim80Q3V061 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim80Q3V061 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.54□□□□□ -0.4
Trim80Q3V061 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.54□□□□□ -0.4
Trim80Q3V061 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim80Q3V061 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim80Q3V061 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim80Q3V061 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim80Q3V061 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim80Q3V061 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms