Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg7Q3ULF4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg7Q3ULF4 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.39□□□□□ -0.11
Spg7Q3ULF4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg7Q3ULF4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg7Q3ULF4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg7Q3ULF4 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Spg7Q3ULF4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Gm7666-201ENSMUST00000146631 819 ntBASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Gm44126-201ENSMUST00000204831 514 ntBASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Gm17931-201ENSMUST00000208132 634 ntBASIC14.38□□□□□ -0.11
Spg7Q3ULF4 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.38□□□□□ -0.11
Spg7Q3ULF4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Gm12029-201ENSMUST00000120073 832 ntBASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Gm15566-201ENSMUST00000121130 590 ntBASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Gm22144-201ENSMUST00000157402 102 ntBASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Gm4310-201ENSMUST00000177847 889 ntBASIC14.37□□□□□ -0.11
Spg7Q3ULF4 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Gm17831-201ENSMUST00000205579 900 ntBASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg7Q3ULF4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spg7Q3ULF4 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spg7Q3ULF4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.36□□□□□ -0.11
Spg7Q3ULF4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spg7Q3ULF4 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Spg7Q3ULF4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spg7Q3ULF4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Spg7Q3ULF4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spg7Q3ULF4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spg7Q3ULF4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms