Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Gm12390-201ENSMUST00000117897 397 ntBASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Gm18711-201ENSMUST00000199341 750 ntBASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nhej1Q3KNJ2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nhej1Q3KNJ2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Nhej1Q3KNJ2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms