Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Sox4Q06831 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.92□□□□□ -0.5
Sox4Q06831 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.92□□□□□ -0.5
Sox4Q06831 Gm27341-201ENSMUST00000183570 106 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Gm27627-201ENSMUST00000183644 150 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Gm29615-201ENSMUST00000185371 697 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Gm28224-201ENSMUST00000186078 697 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Gm29001-201ENSMUST00000186177 697 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Gm28292-201ENSMUST00000186593 697 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Gm28101-201ENSMUST00000187608 697 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Gm29076-201ENSMUST00000187689 697 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Gm28302-201ENSMUST00000187931 697 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Gm28646-201ENSMUST00000188220 697 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Gm28205-201ENSMUST00000189177 697 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Gm29032-201ENSMUST00000189797 697 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Gm28695-201ENSMUST00000190300 697 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Gm37448-201ENSMUST00000192795 697 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.92□□□□□ -0.5
Sox4Q06831 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.92□□□□□ -0.5
Sox4Q06831 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.92□□□□□ -0.5
Sox4Q06831 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Gm5455-201ENSMUST00000058710 715 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.92□□□□□ -0.5
Sox4Q06831 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Sox4Q06831 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.92□□□□□ -0.5
Sox4Q06831 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.92□□□□□ -0.5
Sox4Q06831 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.92□□□□□ -0.5
Sox4Q06831 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox4Q06831 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox4Q06831 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sox4Q06831 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox4Q06831 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox4Q06831 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Gm14277-201ENSMUST00000121195 360 ntBASIC11.91□□□□□ -0.5
Sox4Q06831 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Gm24990-201ENSMUST00000157406 323 ntBASIC11.91□□□□□ -0.5
Sox4Q06831 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sox4Q06831 Gm37666-201ENSMUST00000194110 866 ntBASIC11.91□□□□□ -0.5
Sox4Q06831 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.91□□□□□ -0.5
Sox4Q06831 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.91□□□□□ -0.5
Sox4Q06831 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox4Q06831 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox4Q06831 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox4Q06831 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sox4Q06831 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox4Q06831 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Sox4Q06831 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.91□□□□□ -0.5
Sox4Q06831 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox4Q06831 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Sox4Q06831 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.9□□□□□ -0.5
Sox4Q06831 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Gm11439-201ENSMUST00000118598 409 ntBASIC11.9□□□□□ -0.5
Sox4Q06831 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms