Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox8Q04886 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox8Q04886 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox8Q04886 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox8Q04886 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox8Q04886 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox8Q04886 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Sox8Q04886 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox8Q04886 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Sox8Q04886 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox8Q04886 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox8Q04886 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox8Q04886 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Sox8Q04886 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Sox8Q04886 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox8Q04886 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox8Q04886 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox8Q04886 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox8Q04886 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox8Q04886 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Sox8Q04886 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.76□□□□□ -0.37
Sox8Q04886 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.76□□□□□ -0.37
Sox8Q04886 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox8Q04886 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sox8Q04886 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sox8Q04886 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Sox8Q04886 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sox8Q04886 Gm11450-201ENSMUST00000121144 333 ntBASIC12.75□□□□□ -0.37
Sox8Q04886 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.75□□□□□ -0.37
Sox8Q04886 Gm25881-201ENSMUST00000157783 103 ntBASIC12.75□□□□□ -0.37
Sox8Q04886 Gm23699-201ENSMUST00000158835 135 ntBASIC12.75□□□□□ -0.37
Sox8Q04886 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.75□□□□□ -0.37
Sox8Q04886 Gm28686-201ENSMUST00000187404 609 ntBASIC12.75□□□□□ -0.37
Sox8Q04886 Gm3332-201ENSMUST00000189337 928 ntBASIC12.75□□□□□ -0.37
Sox8Q04886 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.75□□□□□ -0.37
Sox8Q04886 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.75□□□□□ -0.37
Sox8Q04886 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.75□□□□□ -0.37
Sox8Q04886 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Sox8Q04886 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox8Q04886 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.74□□□□□ -0.37
Sox8Q04886 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sox8Q04886 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox8Q04886 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sox8Q04886 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Gm12196-201ENSMUST00000120954 262 ntBASIC12.74□□□□□ -0.37
Sox8Q04886 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.74□□□□□ -0.37
Sox8Q04886 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.74□□□□□ -0.37
Sox8Q04886 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox8Q04886 Gm20426-201ENSMUST00000173657 440 ntBASIC12.74□□□□□ -0.37
Sox8Q04886 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.74□□□□□ -0.37
Sox8Q04886 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox8Q04886 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox8Q04886 Gm9797-202ENSMUST00000218003 294 ntBASIC12.74□□□□□ -0.37
Sox8Q04886 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Sox8Q04886 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Sox8Q04886 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sox8Q04886 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sox8Q04886 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sox8Q04886 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms