Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.11□□□□□ -0.47
Lim2P56563 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Lim2P56563 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lim2P56563 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Lim2P56563 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.1□□□□□ -0.47
Lim2P56563 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.1□□□□□ -0.47
Lim2P56563 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.1□□□□□ -0.47
Lim2P56563 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.1□□□□□ -0.47
Lim2P56563 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Gm11989-201ENSMUST00000117240 672 ntBASIC12.1□□□□□ -0.47
Lim2P56563 Gm11362-201ENSMUST00000118838 850 ntBASIC12.1□□□□□ -0.47
Lim2P56563 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.1□□□□□ -0.47
Lim2P56563 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.1□□□□□ -0.47
Lim2P56563 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.1□□□□□ -0.47
Lim2P56563 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lim2P56563 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lim2P56563 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.1□□□□□ -0.47
Lim2P56563 Gm44262-201ENSMUST00000204969 372 ntBASIC12.1□□□□□ -0.47
Lim2P56563 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.1□□□□□ -0.47
Lim2P56563 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.1□□□□□ -0.47
Lim2P56563 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.1□□□□□ -0.47
Lim2P56563 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lim2P56563 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lim2P56563 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lim2P56563 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lim2P56563 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.09□□□□□ -0.47
Lim2P56563 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Gm23912-201ENSMUST00000104687 87 ntBASIC12.09□□□□□ -0.47
Lim2P56563 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.09□□□□□ -0.47
Lim2P56563 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.09□□□□□ -0.47
Lim2P56563 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Rprl1-201ENSMUST00000158050 327 ntBASIC12.09□□□□□ -0.47
Lim2P56563 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.09□□□□□ -0.47
Lim2P56563 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lim2P56563 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.09□□□□□ -0.47
Lim2P56563 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.09□□□□□ -0.47
Lim2P56563 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.09□□□□□ -0.47
Lim2P56563 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Mir433-201ENSMUST00000093564 124 ntBASIC12.09□□□□□ -0.47
Lim2P56563 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.09□□□□□ -0.47
Lim2P56563 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Lim2P56563 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.09□□□□□ -0.47
Lim2P56563 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lim2P56563 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lim2P56563 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Lim2P56563 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lim2P56563 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lim2P56563 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Lim2P56563 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.08□□□□□ -0.47
Lim2P56563 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms