Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Cdh11P55288 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cdh11P55288 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cdh11P55288 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Cdh11P55288 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cdh11P55288 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh11P55288 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cdh11P55288 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cdh11P55288 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cdh11P55288 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cdh11P55288 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cdh11P55288 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Cdh11P55288 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.05□□□□□ -0.64
Cdh11P55288 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdh11P55288 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Cdh11P55288 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.05□□□□□ -0.64
Cdh11P55288 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Gm14704-201ENSMUST00000120300 874 ntBASIC11.05□□□□□ -0.64
Cdh11P55288 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.05□□□□□ -0.64
Cdh11P55288 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.05□□□□□ -0.64
Cdh11P55288 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Cdh11P55288 Gm38158-201ENSMUST00000194617 339 ntBASIC11.05□□□□□ -0.64
Cdh11P55288 Gm43758-201ENSMUST00000199500 367 ntBASIC11.05□□□□□ -0.64
Cdh11P55288 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdh11P55288 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cdh11P55288 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cdh11P55288 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cdh11P55288 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdh11P55288 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdh11P55288 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh11P55288 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh11P55288 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.04□□□□□ -0.64
Cdh11P55288 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh11P55288 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Cdh11P55288 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.04□□□□□ -0.64
Cdh11P55288 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh11P55288 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdh11P55288 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.04□□□□□ -0.64
Cdh11P55288 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.04□□□□□ -0.64
Cdh11P55288 Gm8738-201ENSMUST00000172606 329 ntBASIC11.04□□□□□ -0.64
Cdh11P55288 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cdh11P55288 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.04□□□□□ -0.64
Cdh11P55288 Gm7046-201ENSMUST00000221351 977 ntBASIC11.04□□□□□ -0.64
Cdh11P55288 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.04□□□□□ -0.64
Cdh11P55288 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cdh11P55288 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Cdh11P55288 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms