Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.25□□□□□ -0.77
Ccl11P48298 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.25□□□□□ -0.77
Ccl11P48298 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.25□□□□□ -0.77
Ccl11P48298 Gm23699-201ENSMUST00000158835 135 ntBASIC10.25□□□□□ -0.77
Ccl11P48298 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.25□□□□□ -0.77
Ccl11P48298 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.25□□□□□ -0.77
Ccl11P48298 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.25□□□□□ -0.77
Ccl11P48298 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Ccl11P48298 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.25□□□□□ -0.77
Ccl11P48298 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.25□□□□□ -0.77
Ccl11P48298 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Ccl11P48298 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl11P48298 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Ccl11P48298 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.24□□□□□ -0.77
Ccl11P48298 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.24□□□□□ -0.77
Ccl11P48298 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Ccl11P48298 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Ccl11P48298 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Ccl11P48298 Gm26286-201ENSMUST00000104166 134 ntBASIC10.24□□□□□ -0.77
Ccl11P48298 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Gm14058-201ENSMUST00000116082 735 ntBASIC10.24□□□□□ -0.77
Ccl11P48298 Gm12196-201ENSMUST00000120954 262 ntBASIC10.24□□□□□ -0.77
Ccl11P48298 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.24□□□□□ -0.77
Ccl11P48298 Gm3332-201ENSMUST00000189337 928 ntBASIC10.24□□□□□ -0.77
Ccl11P48298 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.24□□□□□ -0.77
Ccl11P48298 Gm44100-201ENSMUST00000204329 436 ntBASIC10.24□□□□□ -0.77
Ccl11P48298 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Gm8959-201ENSMUST00000213150 571 ntBASIC10.24□□□□□ -0.77
Ccl11P48298 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.24□□□□□ -0.77
Ccl11P48298 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.24□□□□□ -0.77
Ccl11P48298 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Ccl11P48298 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.24□□□□□ -0.77
Ccl11P48298 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ccl11P48298 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl11P48298 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl11P48298 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl11P48298 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl11P48298 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl11P48298 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl11P48298 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Ccl11P48298 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl11P48298 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl11P48298 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl11P48298 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl11P48298 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccl11P48298 Gm13035-201ENSMUST00000117496 342 ntBASIC10.23□□□□□ -0.77
Ccl11P48298 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.23□□□□□ -0.77
Ccl11P48298 Gm12164-201ENSMUST00000121695 551 ntBASIC10.23□□□□□ -0.77
Ccl11P48298 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.23□□□□□ -0.77
Ccl11P48298 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.23□□□□□ -0.77
Ccl11P48298 Gm8343-201ENSMUST00000182705 994 ntBASIC10.23□□□□□ -0.77
Ccl11P48298 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.23□□□□□ -0.77
Ccl11P48298 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.23□□□□□ -0.77
Ccl11P48298 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.23□□□□□ -0.77
Ccl11P48298 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Ccl11P48298 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms