Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.49□□□□□ -0.57
Cdx2P43241 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.49□□□□□ -0.57
Cdx2P43241 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdx2P43241 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.49□□□□□ -0.57
Cdx2P43241 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdx2P43241 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdx2P43241 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdx2P43241 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdx2P43241 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Cdx2P43241 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Gm25880-201ENSMUST00000104331 132 ntBASIC11.48□□□□□ -0.57
Cdx2P43241 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdx2P43241 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.48□□□□□ -0.57
Cdx2P43241 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.48□□□□□ -0.57
Cdx2P43241 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.48□□□□□ -0.57
Cdx2P43241 Gm18367-201ENSMUST00000176139 600 ntBASIC11.48□□□□□ -0.57
Cdx2P43241 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdx2P43241 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.48□□□□□ -0.57
Cdx2P43241 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.48□□□□□ -0.57
Cdx2P43241 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdx2P43241 Gm2553-201ENSMUST00000215986 605 ntBASIC11.48□□□□□ -0.57
Cdx2P43241 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdx2P43241 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.48□□□□□ -0.57
Cdx2P43241 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdx2P43241 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.48□□□□□ -0.57
Cdx2P43241 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.48□□□□□ -0.57
Cdx2P43241 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdx2P43241 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.48□□□□□ -0.57
Cdx2P43241 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdx2P43241 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cdx2P43241 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Gm25076-201ENSMUST00000104098 132 ntBASIC11.47□□□□□ -0.57
Cdx2P43241 Gm26013-201ENSMUST00000104404 119 ntBASIC11.47□□□□□ -0.57
Cdx2P43241 Gm22711-201ENSMUST00000116890 133 ntBASIC11.47□□□□□ -0.57
Cdx2P43241 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.47□□□□□ -0.57
Cdx2P43241 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Gm22442-201ENSMUST00000157256 144 ntBASIC11.47□□□□□ -0.57
Cdx2P43241 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.47□□□□□ -0.57
Cdx2P43241 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdx2P43241 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.47□□□□□ -0.57
Cdx2P43241 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cdx2P43241 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.47□□□□□ -0.57
Cdx2P43241 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms