Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.92□□□□□ -0.34
Mmp3P28862 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Mmp3P28862 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Mmp3P28862 Gm15207-201ENSMUST00000119259 442 ntBASIC12.92□□□□□ -0.34
Mmp3P28862 Gm15573-201ENSMUST00000119487 540 ntBASIC12.92□□□□□ -0.34
Mmp3P28862 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Mmp3P28862 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Gm17391-201ENSMUST00000171036 126 ntBASIC12.92□□□□□ -0.34
Mmp3P28862 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.92□□□□□ -0.34
Mmp3P28862 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Mmp3P28862 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.92□□□□□ -0.34
Mmp3P28862 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.92□□□□□ -0.34
Mmp3P28862 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.92□□□□□ -0.34
Mmp3P28862 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.92□□□□□ -0.34
Mmp3P28862 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.92□□□□□ -0.34
Mmp3P28862 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Mmp3P28862 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Mmp3P28862 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.92□□□□□ -0.34
Mmp3P28862 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Mmp3P28862 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.92□□□□□ -0.34
Mmp3P28862 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Mmp3P28862 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Mmp3P28862 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Gm12579-201ENSMUST00000118040 783 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.91□□□□□ -0.34
Mmp3P28862 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.91□□□□□ -0.34
Mmp3P28862 Gm22144-201ENSMUST00000157402 102 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Mmp3P28862 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 Gm38117-201ENSMUST00000194653 939 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 Gm5714-201ENSMUST00000197343 566 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 Gm8285-201ENSMUST00000208293 759 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Mmp3P28862 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Mmp3P28862 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Mmp3P28862 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Mmp3P28862 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Mmp3P28862 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Mmp3P28862 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Mmp3P28862 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Mmp3P28862 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.91□□□□□ -0.34
Mmp3P28862 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.9□□□□□ -0.34
Mmp3P28862 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Mmp3P28862 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Mmp3P28862 Map1b-203ENSMUST00000223725 2669 ntBASIC12.9□□□□□ -0.34
Mmp3P28862 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms