Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gja4P28235 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gja4P28235 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Gja4P28235 Gm22920-201ENSMUST00000102175 109 ntBASIC12.09□□□□□ -0.47
Gja4P28235 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.09□□□□□ -0.47
Gja4P28235 Gm11628-201ENSMUST00000117568 171 ntBASIC12.09□□□□□ -0.47
Gja4P28235 Gm8737-201ENSMUST00000122208 642 ntBASIC12.09□□□□□ -0.47
Gja4P28235 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gja4P28235 Gm23771-201ENSMUST00000178702 110 ntBASIC12.09□□□□□ -0.47
Gja4P28235 Gm27910-201ENSMUST00000185004 107 ntBASIC12.09□□□□□ -0.47
Gja4P28235 Gm29499-201ENSMUST00000189151 486 ntBASIC12.09□□□□□ -0.47
Gja4P28235 Gm28329-201ENSMUST00000191208 689 ntBASIC12.09□□□□□ -0.47
Gja4P28235 Gm29171-201ENSMUST00000191397 486 ntBASIC12.09□□□□□ -0.47
Gja4P28235 Gm43058-201ENSMUST00000197645 625 ntBASIC12.09□□□□□ -0.47
Gja4P28235 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.09□□□□□ -0.47
Gja4P28235 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.09□□□□□ -0.47
Gja4P28235 Gm2553-201ENSMUST00000215986 605 ntBASIC12.09□□□□□ -0.47
Gja4P28235 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Gja4P28235 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Gja4P28235 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Gja4P28235 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.09□□□□□ -0.47
Gja4P28235 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gja4P28235 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gja4P28235 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gja4P28235 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gja4P28235 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gja4P28235 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gja4P28235 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gja4P28235 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Gja4P28235 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Gja4P28235 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.08□□□□□ -0.48
Gja4P28235 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.08□□□□□ -0.48
Gja4P28235 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.08□□□□□ -0.48
Gja4P28235 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.08□□□□□ -0.48
Gja4P28235 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Gm11949-201ENSMUST00000117640 372 ntBASIC12.08□□□□□ -0.48
Gja4P28235 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.08□□□□□ -0.48
Gja4P28235 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.08□□□□□ -0.48
Gja4P28235 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.08□□□□□ -0.48
Gja4P28235 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.08□□□□□ -0.48
Gja4P28235 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.08□□□□□ -0.48
Gja4P28235 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.08□□□□□ -0.48
Gja4P28235 Gm23045-201ENSMUST00000175041 96 ntBASIC12.08□□□□□ -0.48
Gja4P28235 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.08□□□□□ -0.48
Gja4P28235 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Gm9358-201ENSMUST00000183067 927 ntBASIC12.08□□□□□ -0.48
Gja4P28235 Mir8115-201ENSMUST00000184992 119 ntBASIC12.08□□□□□ -0.48
Gja4P28235 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.08□□□□□ -0.48
Gja4P28235 Gm43186-201ENSMUST00000198130 824 ntBASIC12.08□□□□□ -0.48
Gja4P28235 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.08□□□□□ -0.48
Gja4P28235 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Gm6867-201ENSMUST00000219165 425 ntBASIC12.08□□□□□ -0.48
Gja4P28235 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.08□□□□□ -0.48
Gja4P28235 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Gja4P28235 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gja4P28235 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms