Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nfkb1P25799 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nfkb1P25799 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nfkb1P25799 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.46□□□□□ -0.41
Nfkb1P25799 Gm23912-201ENSMUST00000104687 87 ntBASIC12.46□□□□□ -0.41
Nfkb1P25799 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.46□□□□□ -0.41
Nfkb1P25799 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.46□□□□□ -0.41
Nfkb1P25799 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.46□□□□□ -0.41
Nfkb1P25799 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.46□□□□□ -0.41
Nfkb1P25799 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.46□□□□□ -0.41
Nfkb1P25799 Gm44882-201ENSMUST00000205702 802 ntBASIC12.46□□□□□ -0.41
Nfkb1P25799 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.46□□□□□ -0.41
Nfkb1P25799 Gm4607-201ENSMUST00000206649 577 ntBASIC12.46□□□□□ -0.41
Nfkb1P25799 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nfkb1P25799 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.46□□□□□ -0.41
Nfkb1P25799 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nfkb1P25799 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nfkb1P25799 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nfkb1P25799 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nfkb1P25799 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nfkb1P25799 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nfkb1P25799 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Nfkb1P25799 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nfkb1P25799 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nfkb1P25799 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.46□□□□□ -0.42
Nfkb1P25799 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.46□□□□□ -0.42
Nfkb1P25799 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.42
Nfkb1P25799 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nfkb1P25799 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nfkb1P25799 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.46□□□□□ -0.42
Nfkb1P25799 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.46□□□□□ -0.42
Nfkb1P25799 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nfkb1P25799 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nfkb1P25799 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nfkb1P25799 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.45□□□□□ -0.42
Nfkb1P25799 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nfkb1P25799 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nfkb1P25799 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Nfkb1P25799 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Nfkb1P25799 Gm23596-201ENSMUST00000104304 132 ntBASIC12.45□□□□□ -0.42
Nfkb1P25799 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Gm14058-201ENSMUST00000116082 735 ntBASIC12.45□□□□□ -0.42
Nfkb1P25799 Gm14263-201ENSMUST00000117955 746 ntBASIC12.45□□□□□ -0.42
Nfkb1P25799 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.45□□□□□ -0.42
Nfkb1P25799 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.45□□□□□ -0.42
Nfkb1P25799 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Nfkb1P25799 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.45□□□□□ -0.42
Nfkb1P25799 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Nfkb1P25799 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Nfkb1P25799 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.45□□□□□ -0.42
Nfkb1P25799 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nfkb1P25799 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Nfkb1P25799 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nfkb1P25799 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nfkb1P25799 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.45□□□□□ -0.42
Nfkb1P25799 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nfkb1P25799 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.44□□□□□ -0.42
Nfkb1P25799 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nfkb1P25799 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm13035-201ENSMUST00000117496 342 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm9062-201ENSMUST00000117712 727 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms