Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
Col8a2P25318 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Col8a2P25318 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Gm12566-201ENSMUST00000121479 359 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.09□□□□□ -0.79
Col8a2P25318 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.09□□□□□ -0.79
Col8a2P25318 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.09□□□□□ -0.79
Col8a2P25318 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.09□□□□□ -0.79
Col8a2P25318 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 Gm28071-201ENSMUST00000190355 478 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 Gm37246-201ENSMUST00000192665 835 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 Gm18893-201ENSMUST00000198416 943 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Col8a2P25318 Gm44124-201ENSMUST00000204159 472 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Col8a2P25318 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Gm5369-201ENSMUST00000217499 588 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Col8a2P25318 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Col8a2P25318 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Col8a2P25318 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Col8a2P25318 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Col8a2P25318 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Col8a2P25318 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Col8a2P25318 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.08□□□□□ -0.8
Col8a2P25318 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.08□□□□□ -0.8
Col8a2P25318 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Col8a2P25318 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.08□□□□□ -0.8
Col8a2P25318 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.08□□□□□ -0.8
Col8a2P25318 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.08□□□□□ -0.8
Col8a2P25318 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.08□□□□□ -0.8
Col8a2P25318 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.08□□□□□ -0.8
Col8a2P25318 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.08□□□□□ -0.8
Col8a2P25318 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Col8a2P25318 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.08□□□□□ -0.8
Col8a2P25318 AU022133-201ENSMUST00000200601 873 ntBASIC10.08□□□□□ -0.8
Col8a2P25318 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.08□□□□□ -0.8
Col8a2P25318 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Gm17827-201ENSMUST00000211825 742 ntBASIC10.08□□□□□ -0.8
Col8a2P25318 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.08□□□□□ -0.8
Col8a2P25318 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Col8a2P25318 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.08□□□□□ -0.8
Col8a2P25318 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms