Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.02□□□□□ -0.65
Cbx3P23198 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cbx3P23198 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.02□□□□□ -0.65
Cbx3P23198 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.02□□□□□ -0.65
Cbx3P23198 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.02□□□□□ -0.65
Cbx3P23198 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.02□□□□□ -0.65
Cbx3P23198 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.02□□□□□ -0.65
Cbx3P23198 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cbx3P23198 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.02□□□□□ -0.65
Cbx3P23198 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.02□□□□□ -0.65
Cbx3P23198 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.02□□□□□ -0.65
Cbx3P23198 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cbx3P23198 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.02□□□□□ -0.65
Cbx3P23198 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.02□□□□□ -0.65
Cbx3P23198 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.02□□□□□ -0.65
Cbx3P23198 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cbx3P23198 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cbx3P23198 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cbx3P23198 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cbx3P23198 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.02□□□□□ -0.65
Cbx3P23198 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cbx3P23198 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cbx3P23198 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cbx3P23198 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.02□□□□□ -0.65
Cbx3P23198 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cbx3P23198 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cbx3P23198 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cbx3P23198 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cbx3P23198 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cbx3P23198 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.01□□□□□ -0.65
Cbx3P23198 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cbx3P23198 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.01□□□□□ -0.65
Cbx3P23198 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Gm10417-201ENSMUST00000194341 3522 ntBASIC11.01□□□□□ -0.65
Cbx3P23198 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.01□□□□□ -0.65
Cbx3P23198 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.01□□□□□ -0.65
Cbx3P23198 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cbx3P23198 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.01□□□□□ -0.65
Cbx3P23198 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.01□□□□□ -0.65
Cbx3P23198 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.01□□□□□ -0.65
Cbx3P23198 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.01□□□□□ -0.65
Cbx3P23198 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.01□□□□□ -0.65
Cbx3P23198 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cbx3P23198 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cbx3P23198 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.01□□□□□ -0.65
Cbx3P23198 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Cbx3P23198 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.01□□□□□ -0.65
Cbx3P23198 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.01□□□□□ -0.65
Cbx3P23198 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cbx3P23198 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.01□□□□□ -0.65
Cbx3P23198 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.01□□□□□ -0.65
Cbx3P23198 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cbx3P23198 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cbx3P23198 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms