Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rb1P13405 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rb1P13405 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rb1P13405 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rb1P13405 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rb1P13405 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rb1P13405 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.49□□□□□ -0.41
Rb1P13405 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rb1P13405 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rb1P13405 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rb1P13405 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rb1P13405 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rb1P13405 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rb1P13405 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Rb1P13405 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rb1P13405 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rb1P13405 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rb1P13405 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.48□□□□□ -0.41
Rb1P13405 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rb1P13405 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.48□□□□□ -0.41
Rb1P13405 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.48□□□□□ -0.41
Rb1P13405 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rb1P13405 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rb1P13405 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.48□□□□□ -0.41
Rb1P13405 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.48□□□□□ -0.41
Rb1P13405 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.48□□□□□ -0.41
Rb1P13405 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Rb1P13405 Gm25732-201ENSMUST00000175168 60 ntBASIC12.48□□□□□ -0.41
Rb1P13405 Gm27023-201ENSMUST00000182372 285 ntBASIC12.48□□□□□ -0.41
Rb1P13405 Gm28450-201ENSMUST00000187349 638 ntBASIC12.48□□□□□ -0.41
Rb1P13405 Gm37201-201ENSMUST00000191845 523 ntBASIC12.48□□□□□ -0.41
Rb1P13405 Gm19931-201ENSMUST00000198920 368 ntBASIC12.48□□□□□ -0.41
Rb1P13405 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rb1P13405 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.48□□□□□ -0.41
Rb1P13405 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Gm10312-201ENSMUST00000078515 489 ntBASIC12.48□□□□□ -0.41
Rb1P13405 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rb1P13405 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.48□□□□□ -0.41
Rb1P13405 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.48□□□□□ -0.41
Rb1P13405 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Gm37057-201ENSMUST00000192624 1916 ntBASIC12.48□□□□□ -0.41
Rb1P13405 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.48□□□□□ -0.41
Rb1P13405 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rb1P13405 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rb1P13405 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rb1P13405 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rb1P13405 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rb1P13405 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rb1P13405 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rb1P13405 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.47□□□□□ -0.41
Rb1P13405 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rb1P13405 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rb1P13405 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Rb1P13405 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rb1P13405 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rb1P13405 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rb1P13405 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rb1P13405 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.47□□□□□ -0.41
Rb1P13405 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rb1P13405 Gm14208-201ENSMUST00000119645 678 ntBASIC12.47□□□□□ -0.41
Rb1P13405 Gm12291-201ENSMUST00000121627 311 ntBASIC12.47□□□□□ -0.41
Rb1P13405 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.47□□□□□ -0.41
Rb1P13405 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.47□□□□□ -0.41
Rb1P13405 Gm22334-201ENSMUST00000158070 133 ntBASIC12.47□□□□□ -0.41
Rb1P13405 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rb1P13405 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rb1P13405 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.47□□□□□ -0.41
Rb1P13405 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rb1P13405 Gm25700-201ENSMUST00000177693 110 ntBASIC12.47□□□□□ -0.41
Rb1P13405 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rb1P13405 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.47□□□□□ -0.41
Rb1P13405 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.47□□□□□ -0.41
Rb1P13405 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.47□□□□□ -0.41
Rb1P13405 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.47□□□□□ -0.41
Rb1P13405 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.47□□□□□ -0.41
Rb1P13405 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rb1P13405 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rb1P13405 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms