Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Gm15276-201ENSMUST00000145953 498 ntBASIC10.56□□□□□ -0.72
PtcraP0C6B2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Gm5070-201ENSMUST00000177599 862 ntBASIC10.56□□□□□ -0.72
PtcraP0C6B2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.56□□□□□ -0.72
PtcraP0C6B2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PtcraP0C6B2 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.56□□□□□ -0.72
PtcraP0C6B2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Gm13665-201ENSMUST00000120830 528 ntBASIC10.55□□□□□ -0.72
PtcraP0C6B2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Gm37259-201ENSMUST00000193903 849 ntBASIC10.55□□□□□ -0.72
PtcraP0C6B2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.55□□□□□ -0.72
PtcraP0C6B2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.55□□□□□ -0.72
PtcraP0C6B2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PtcraP0C6B2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
PtcraP0C6B2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PtcraP0C6B2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
PtcraP0C6B2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PtcraP0C6B2 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
PtcraP0C6B2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PtcraP0C6B2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PtcraP0C6B2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PtcraP0C6B2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PtcraP0C6B2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PtcraP0C6B2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PtcraP0C6B2 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC10.54□□□□□ -0.72
PtcraP0C6B2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms