Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.6■□□□□ 0.09
Hoxc9P09633 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Hoxc9P09633 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Hoxc9P09633 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Hoxc9P09633 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxc9P09633 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC15.6■□□□□ 0.09
Hoxc9P09633 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Hoxc9P09633 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Hoxc9P09633 Gm26013-201ENSMUST00000104404 119 ntBASIC15.59■□□□□ 0.09
Hoxc9P09633 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC15.59■□□□□ 0.09
Hoxc9P09633 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC15.59■□□□□ 0.09
Hoxc9P09633 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC15.59■□□□□ 0.09
Hoxc9P09633 Gm17877-201ENSMUST00000192578 814 ntBASIC15.59■□□□□ 0.09
Hoxc9P09633 Gm43852-201ENSMUST00000202098 917 ntBASIC15.59■□□□□ 0.09
Hoxc9P09633 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC15.59■□□□□ 0.09
Hoxc9P09633 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC15.59■□□□□ 0.09
Hoxc9P09633 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC15.59■□□□□ 0.09
Hoxc9P09633 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Gm9873-201ENSMUST00000063891 1097 ntBASIC15.59■□□□□ 0.09
Hoxc9P09633 Gm25517-201ENSMUST00000083865 134 ntBASIC15.59■□□□□ 0.09
Hoxc9P09633 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC15.59■□□□□ 0.09
Hoxc9P09633 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Hoxc9P09633 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Gm44758-201ENSMUST00000206096 2068 ntBASIC15.59■□□□□ 0.09
Hoxc9P09633 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Hoxc9P09633 Gm14132-201ENSMUST00000117188 1719 ntBASIC15.59■□□□□ 0.09
Hoxc9P09633 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hoxc9P09633 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Hoxc9P09633 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hoxc9P09633 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Hoxc9P09633 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Hoxc9P09633 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hoxc9P09633 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
Hoxc9P09633 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.58■□□□□ 0.08
Hoxc9P09633 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Hoxc9P09633 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC15.58■□□□□ 0.08
Hoxc9P09633 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC15.58■□□□□ 0.08
Hoxc9P09633 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC15.58■□□□□ 0.08
Hoxc9P09633 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxc9P09633 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Hoxc9P09633 Gm7593-201ENSMUST00000187246 644 ntBASIC15.58■□□□□ 0.08
Hoxc9P09633 Gm9136-201ENSMUST00000193368 454 ntBASIC15.58■□□□□ 0.08
Hoxc9P09633 Gm44124-201ENSMUST00000204159 472 ntBASIC15.58■□□□□ 0.08
Hoxc9P09633 Gm3028-201ENSMUST00000213805 1119 ntBASIC15.58■□□□□ 0.08
Hoxc9P09633 CT025553.1-201ENSMUST00000226292 299 ntBASIC15.58■□□□□ 0.08
Hoxc9P09633 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxc9P09633 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxc9P09633 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxc9P09633 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxc9P09633 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC15.58■□□□□ 0.08
Hoxc9P09633 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxc9P09633 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxc9P09633 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxc9P09633 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxc9P09633 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.58■□□□□ 0.08
Hoxc9P09633 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Hoxc9P09633 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
Hoxc9P09633 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxc9P09633 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxc9P09633 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxc9P09633 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Hoxc9P09633 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.57■□□□□ 0.08
Hoxc9P09633 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxc9P09633 Gm8531-201ENSMUST00000188319 893 ntBASIC15.57■□□□□ 0.08
Hoxc9P09633 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC15.57■□□□□ 0.08
Hoxc9P09633 Gm8574-201ENSMUST00000203207 924 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms