Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Gm7857-201ENSMUST00000117957 358 ntBASIC11.92□□□□□ -0.5
Hoxa4P06798 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.92□□□□□ -0.5
Hoxa4P06798 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.92□□□□□ -0.5
Hoxa4P06798 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Hoxa4P06798 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hoxa4P06798 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.92□□□□□ -0.5
Hoxa4P06798 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Hoxa4P06798 Gm5363-201ENSMUST00000211927 938 ntBASIC11.92□□□□□ -0.5
Hoxa4P06798 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.92□□□□□ -0.5
Hoxa4P06798 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.92□□□□□ -0.5
Hoxa4P06798 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hoxa4P06798 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hoxa4P06798 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxa4P06798 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Hoxa4P06798 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxa4P06798 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.91□□□□□ -0.5
Hoxa4P06798 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.91□□□□□ -0.5
Hoxa4P06798 Gm4909-201ENSMUST00000118749 794 ntBASIC11.91□□□□□ -0.5
Hoxa4P06798 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Hoxa4P06798 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxa4P06798 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.91□□□□□ -0.5
Hoxa4P06798 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.91□□□□□ -0.5
Hoxa4P06798 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.91□□□□□ -0.5
Hoxa4P06798 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.91□□□□□ -0.5
Hoxa4P06798 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.91□□□□□ -0.5
Hoxa4P06798 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.91□□□□□ -0.5
Hoxa4P06798 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa4P06798 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxa4P06798 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.9□□□□□ -0.5
Hoxa4P06798 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Hoxa4P06798 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Hoxa4P06798 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxa4P06798 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxa4P06798 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hoxa4P06798 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.9□□□□□ -0.5
Hoxa4P06798 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxa4P06798 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Hoxa4P06798 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.9□□□□□ -0.5
Hoxa4P06798 Gm27341-201ENSMUST00000183570 106 ntBASIC11.9□□□□□ -0.5
Hoxa4P06798 AU022133-201ENSMUST00000200601 873 ntBASIC11.9□□□□□ -0.5
Hoxa4P06798 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxa4P06798 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxa4P06798 Gm2553-201ENSMUST00000215986 605 ntBASIC11.9□□□□□ -0.5
Hoxa4P06798 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxa4P06798 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxa4P06798 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.9□□□□□ -0.5
Hoxa4P06798 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms