Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.16□□□□□ -0.62
Cops4O88544 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cops4O88544 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.16□□□□□ -0.62
Cops4O88544 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Gm11637-201ENSMUST00000120601 592 ntBASIC11.16□□□□□ -0.62
Cops4O88544 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.16□□□□□ -0.62
Cops4O88544 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.16□□□□□ -0.62
Cops4O88544 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.16□□□□□ -0.62
Cops4O88544 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.16□□□□□ -0.62
Cops4O88544 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.16□□□□□ -0.62
Cops4O88544 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.16□□□□□ -0.62
Cops4O88544 Gm10146-201ENSMUST00000072739 309 ntBASIC11.16□□□□□ -0.62
Cops4O88544 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.16□□□□□ -0.62
Cops4O88544 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.16□□□□□ -0.62
Cops4O88544 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cops4O88544 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.16□□□□□ -0.62
Cops4O88544 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.16□□□□□ -0.62
Cops4O88544 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cops4O88544 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Cops4O88544 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.15□□□□□ -0.62
Cops4O88544 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.15□□□□□ -0.62
Cops4O88544 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cops4O88544 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Cops4O88544 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cops4O88544 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.15□□□□□ -0.62
Cops4O88544 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.15□□□□□ -0.62
Cops4O88544 Gm11814-201ENSMUST00000119515 929 ntBASIC11.15□□□□□ -0.62
Cops4O88544 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.15□□□□□ -0.62
Cops4O88544 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.15□□□□□ -0.62
Cops4O88544 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.15□□□□□ -0.62
Cops4O88544 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.15□□□□□ -0.62
Cops4O88544 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.15□□□□□ -0.62
Cops4O88544 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.15□□□□□ -0.62
Cops4O88544 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cops4O88544 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Gm37042-201ENSMUST00000193816 581 ntBASIC11.15□□□□□ -0.62
Cops4O88544 Gm37497-201ENSMUST00000195830 798 ntBASIC11.15□□□□□ -0.62
Cops4O88544 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.15□□□□□ -0.62
Cops4O88544 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.15□□□□□ -0.62
Cops4O88544 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cops4O88544 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cops4O88544 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cops4O88544 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cops4O88544 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.15□□□□□ -0.62
Cops4O88544 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.15□□□□□ -0.62
Cops4O88544 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.15□□□□□ -0.62
Cops4O88544 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cops4O88544 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cops4O88544 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cops4O88544 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.15□□□□□ -0.63
Cops4O88544 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cops4O88544 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cops4O88544 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cops4O88544 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms