Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
B020004C17RikJ3QP07 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm15615-201ENSMUST00000118876 198 ntBASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm9089-201ENSMUST00000122027 526 ntBASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm28937-201ENSMUST00000185413 695 ntBASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm29400-201ENSMUST00000187208 695 ntBASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm28662-201ENSMUST00000188446 695 ntBASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm28251-201ENSMUST00000188835 695 ntBASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm37318-201ENSMUST00000194325 695 ntBASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm38017-201ENSMUST00000194768 695 ntBASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm37287-201ENSMUST00000195449 695 ntBASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm37793-201ENSMUST00000195548 695 ntBASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
B020004C17RikJ3QP07 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
B020004C17RikJ3QP07 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
B020004C17RikJ3QP07 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
B020004C17RikJ3QP07 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.46□□□□□ -0.26
B020004C17RikJ3QP07 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
B020004C17RikJ3QP07 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
B020004C17RikJ3QP07 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
B020004C17RikJ3QP07 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
B020004C17RikJ3QP07 Acot6-202ENSMUST00000222921 3622 ntBASIC13.46□□□□□ -0.26
B020004C17RikJ3QP07 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
B020004C17RikJ3QP07 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms