Protein–RNA interactions for Protein: F2Z461

Herc6, E3 ISG15--protein ligase Herc6, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc6F2Z461 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Gm13315-201ENSMUST00000120376 991 ntBASIC11.74□□□□□ -0.53
Herc6F2Z461 Gm11597-201ENSMUST00000121423 964 ntBASIC11.74□□□□□ -0.53
Herc6F2Z461 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.74□□□□□ -0.53
Herc6F2Z461 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Gm27731-201ENSMUST00000185192 107 ntBASIC11.74□□□□□ -0.53
Herc6F2Z461 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.74□□□□□ -0.53
Herc6F2Z461 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Herc6F2Z461 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc6F2Z461 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.73□□□□□ -0.53
Herc6F2Z461 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Herc6F2Z461 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Herc6F2Z461 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Herc6F2Z461 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Gm15824-201ENSMUST00000119516 955 ntBASIC11.73□□□□□ -0.53
Herc6F2Z461 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.73□□□□□ -0.53
Herc6F2Z461 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.73□□□□□ -0.53
Herc6F2Z461 Gm7809-201ENSMUST00000153199 742 ntBASIC11.73□□□□□ -0.53
Herc6F2Z461 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Herc6F2Z461 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.73□□□□□ -0.53
Herc6F2Z461 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.73□□□□□ -0.53
Herc6F2Z461 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.73□□□□□ -0.53
Herc6F2Z461 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.73□□□□□ -0.53
Herc6F2Z461 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Gm8227-201ENSMUST00000223306 571 ntBASIC11.73□□□□□ -0.53
Herc6F2Z461 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.73□□□□□ -0.53
Herc6F2Z461 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Herc6F2Z461 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Herc6F2Z461 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Herc6F2Z461 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Herc6F2Z461 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Herc6F2Z461 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc6F2Z461 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc6F2Z461 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Herc6F2Z461 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc6F2Z461 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Herc6F2Z461 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc6F2Z461 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc6F2Z461 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc6F2Z461 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Herc6F2Z461 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.72□□□□□ -0.53
Herc6F2Z461 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Herc6F2Z461 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc6F2Z461 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc6F2Z461 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms