Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Gm15432-201ENSMUST00000121106 195 ntBASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Gm8343-201ENSMUST00000182705 994 ntBASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Gm4482-201ENSMUST00000200876 742 ntBASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Gm1821-202ENSMUST00000227415 750 ntBASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Gm23251-201ENSMUST00000103773 110 ntBASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Gm13045-201ENSMUST00000119019 712 ntBASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Gm37246-201ENSMUST00000192665 835 ntBASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Gm44882-201ENSMUST00000205702 802 ntBASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.96□□□□□ -0.49
Srp54bE9PXC0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.96□□□□□ -0.49
Srp54bE9PXC0 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srp54bE9PXC0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srp54bE9PXC0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.96□□□□□ -0.5
Srp54bE9PXC0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srp54bE9PXC0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srp54bE9PXC0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.96□□□□□ -0.5
Srp54bE9PXC0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Srp54bE9PXC0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Srp54bE9PXC0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srp54bE9PXC0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Srp54bE9PXC0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms