Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Gm12906-201ENSMUST00000154610 441 ntBASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Gm5706-201ENSMUST00000181525 993 ntBASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Dchs1E9PVD3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Gm27956-201ENSMUST00000175604 260 ntBASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Gm26134-201ENSMUST00000178484 110 ntBASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Gm26875-201ENSMUST00000181006 950 ntBASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Gm5705-201ENSMUST00000066241 711 ntBASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Gm38151-201ENSMUST00000195085 289 ntBASIC10.42□□□□□ -0.74
Dchs1E9PVD3 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Dchs1E9PVD3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Gm24954-201ENSMUST00000178831 110 ntBASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Gm5714-201ENSMUST00000197343 566 ntBASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Mir1905-201ENSMUST00000122779 82 ntBASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Gm26957-201ENSMUST00000182645 977 ntBASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Gm37981-201ENSMUST00000194280 535 ntBASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Dchs1E9PVD3 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms