Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Gm15172-201ENSMUST00000118945 1046 ntBASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Gm3332-201ENSMUST00000189337 928 ntBASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Gm43267-201ENSMUST00000199664 1796 ntBASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC16.36■□□□□ 0.21
Tmf1B9EKI3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Gm15515-201ENSMUST00000117827 822 ntBASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Gm11660-201ENSMUST00000120955 412 ntBASIC16.35■□□□□ 0.21
Tmf1B9EKI3 H2-Q3-201ENSMUST00000172583 608 ntBASIC16.35■□□□□ 0.21
Tmf1B9EKI3 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Gm807-202ENSMUST00000224929 408 ntBASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Gm14267-206ENSMUST00000226870 1209 ntBASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Gm7537-201ENSMUST00000221660 1414 ntBASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Gm44831-201ENSMUST00000208469 2989 ntBASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tmf1B9EKI3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 AC133602.1-201ENSMUST00000227510 509 ntBASIC16.34■□□□□ 0.21
Tmf1B9EKI3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tmf1B9EKI3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms