Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm7719-201ENSMUST00000182374 975 ntBASIC12.2□□□□□ -0.46
Col4a6B1AVK5 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Gm7536-201ENSMUST00000077389 444 ntBASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Gm5453-201ENSMUST00000080866 447 ntBASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm11619-201ENSMUST00000117474 237 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm11560-201ENSMUST00000117567 948 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm22146-201ENSMUST00000157397 288 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm22379-201ENSMUST00000157480 131 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm26976-201ENSMUST00000182929 908 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm6855-201ENSMUST00000206307 790 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm14071-201ENSMUST00000117817 509 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm5700-201ENSMUST00000191483 989 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm44647-201ENSMUST00000207402 428 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Gm5468-202ENSMUST00000227851 682 ntBASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a6B1AVK5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Gm12663-201ENSMUST00000118481 958 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms