Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Gm23949-201ENSMUST00000104027 127 ntBASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Gm24231-201ENSMUST00000104315 133 ntBASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Rmrp-201ENSMUST00000157463 271 ntBASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.5□□□□□ -0.09
Cfap99A0A140LIX9 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Gm15711-201ENSMUST00000118889 535 ntBASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Gm12380-201ENSMUST00000119012 544 ntBASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Gm11597-201ENSMUST00000121423 964 ntBASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Matn2-203ENSMUST00000226766 3252 ntBASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cfap99A0A140LIX9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Gm13408-201ENSMUST00000119822 798 ntBASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Gm11450-201ENSMUST00000121144 333 ntBASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Gm13935-201ENSMUST00000121859 798 ntBASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cfap99A0A140LIX9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.47□□□□□ -0.09
Cfap99A0A140LIX9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap99A0A140LIX9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap99A0A140LIX9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap99A0A140LIX9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap99A0A140LIX9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cfap99A0A140LIX9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap99A0A140LIX9 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cfap99A0A140LIX9 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.47□□□□□ -0.09
Cfap99A0A140LIX9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms